Can I use Qiime2 to analyze my SBanalyzer output?

Yes but you must have a Qiime2 environment, R, and SBanalyzer version 3 installed, and run the ASV Expert User Protocol to produce a ‘.biom’ file and other QIIME-ready files from the ASV results.   After running the Expert User Protocol to generate ASVs, import  your ASV .fasta, .biom, .tax files into QIIME2. The user is required to generate a .tsv file containing relevant sample metadata (time point info, health conditions, treatments, etc). For further information go to

This entry was posted in . Bookmark the permalink.

Comment on this FAQ

Your email address will not be published. Required fields are marked *

For security, use of Google's reCAPTCHA service is required which is subject to the Google Privacy Policy and Terms of Use.

I agree to these terms.