What are the primer sequences?

Consensus sequence for V1-V3:

  • 27f AGRRTTYGATYHTDGYTYAG
  • 515r TYACCGCRRCKGCTGGCAC

Consensus sequence for V4:

  • 515F GTGRCAGCKGRRGCGGTYA
  • 806R GGAYTACNVGGGTHTCTAAK

Consensus sequence for V1-V9:

  • 27f AGRRTTYGATYHTDGYTYAG
  • 1492r TASVGHTACCTTGTTACCGACTT

Consensus sequence for Strain ID:

  • 27f AGRRTTYGATYHTDGYTYAG
  • R AGTACYRHRARGGAANGR
This entry was posted in . Bookmark the permalink.

Comment on this FAQ

Your email address will not be published. Required fields are marked *

For security, use of Google's reCAPTCHA service is required which is subject to the Google Privacy Policy and Terms of Use.

I agree to these terms.