On-demand Webinar: HiFi Sequencing for Metagenomics

View the on-demand webinar from the PacBio/CSHL Microbiome Virtual Workshop titled "HiFi Sequencing for Metagenomics"
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Protocol for High Density Multiplexing on PacBio Sequel Systems

Download the Protocol for High Density Multiplexing on PacBio® Sequel® Systems.
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On-demand Webinar: Identification and Classification of Novel Bacterial Strains

The Shoreline Complete StrainID, SBanalyzer software, and Athena database identify Amplicon Sequence Variants and classify novel strains.
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Low-Input Single Molecule HiFi Sequencing for Metagenomic Samples Using Shoreline Breaker

Joint poster with PacBio from the Cold Spring Harbor Microbiome Virtual Conference, highlighting metagenomics testing completed by PacBio using DNA extracted from the Shoreline Breaker instrument and kit.
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Pre-print: Tracking Enteric Bacteria in Premature Infants

ASV fingerprints from longitudinal microbiome samples of twins from different NICUs were analyzed using StrainID and DADA2 and demonstrated the potential to track the source and spread of both commensals and pathogens.
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Shoreline Wave for Illumina Brochure

Fast track your 16S analysis with the Shoreline Wave™, the fastest and easiest 16S kit for the Illumina platform. Download our brochure to learn more.
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Shoreline Wave for PacBio Brochure

Maximize microbial coverage and taxonomic resolution with the Shoreline Wave StrainID™ PCR Kit, featuring 16S & StrainID amplification for PacBio Sequel Systems. Download our brochure to learn more.
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High Density Sample Multiplexing with Shoreline Complete Kits and SBanalyzer Software

Combining many samples into a single sequencing run can greatly reduce the cost of microbiome amplicon sequencing experiments, but preparing an arbitrarily large number of microbiome samples for sequencing can be a challenge.
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Shoreline Wave for PacBio Technical Manual

Download the Shoreline Wave for PacBio Technical Manual.
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Shoreline Wave for Illumina Technical Manual

Download the Shoreline Wave for Illumina Technical Manual.
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Shoreline Complete for PacBio Technical Manual

Download the Shoreline Complete for PacBio Technical Manual.
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Shoreline Complete for Illumina Technical Manual

Download the Shoreline Complete for Illumina Technical Manual.
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Strain level microbial differentiation using a novel rRNA microbiome assay

Download our joint poster with The Jackson Laboratory titled "Strain level microbial differentiation using a novel rRNA microbiome assay" presented at The 5th Annual Translational Microbiome Conference, Boston
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Shoreline Rapid Prep Brochure

Shoreline Rapid Prep is a fast and easy-to-use kit designed for efficient and unbiased isolation of high molecular weight (HMW) single-stranded DNA (ssDNA).
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SBanalyzer Quick Start Guide

Stream this FREE video quick start guide to learn how to use the SBanalyzer™️ software to analyze ccs reads from the PacBio Sequel systems. The SBanalyze software powered by the Athena™️ reference database enables strain identification and assignment from the Shoreline Biome's StrainID™️ (16S-ITS-23S) or full length 16S V1-V9 microbiome kits.
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On-demand Webinar: Simple Microbe Analysis with the Shoreline Complete StrainID Kit

Stream this FREE on-demand webinar led by Mark Driscoll, Ph.D., Shoreline’s co-founder and chief science officer, as he walks you through the simple workflow and analysis of this novel assay.
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Dysbiosis of the Gut Microbiome Following Experimental Sepsis in C57BL/6J and Alzheimer’s Disease Transgenic Mice

Download our joint poster with West Virginia University School of Medicine titled "Dysbiosis of the Gut Microbiome Following Experimental Sepsis in C57BL/6J and Alzheimer’s Disease Transgenic Mice" at the Rust Belt Microbiome Conference.
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Sustained Gut Dysbiosis Following Experimental Sepsis in Alzheimer’s Disease Transgenic Mice

Download our joint poster with West Virginia University School of Medicine titled "Sustained Gut Dysbiosis Following Experimental Sepsis in Alzheimer’s Disease Transgenic Mice".
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High Resolution ID of Known and Unknown Gut Bacteria Using 2500 bp rRNA Amplicon

Download our joint poster with UCONN and The Jackson Laboratory titled "High Resolution ID of Known and Unknown Gut Bacteria Using 2500 bp rRNA Amplicon".
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Differential Microbiome Response to Sepsis Detected Using Strain Level rRNA Amplicon

Download our joint poster with the West Virginia University School of Medicine titled "Differential Microbiome Response to Sepsis Detected Using Strain Level rRNA Amplicon" presented at AGBT 2020.
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Rapid Prep Kit Protocols

Download the protocols for the Rapid Prep kit. This fast and easy-to-use kit is designed for the efficient and unbiased isolation of HMW ssDNA.
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On Demand Webinar: Sustained gut dysbiosis in murine polymicrobial sepsis: identification of longitudinal changes in the gut microbiome using StrainID

Learn more about how sepsis can change the gut microbiome in ways that affect health and behavior, and how strain-level microbial profiling reveals that the gut microbiome can change in response to sepsis. Discover why Dr. Candice Brown from WVU chose to use Shoreline Biome's StrainID kit and how you can use it in your research for differentiation of closely related strains within and across samples, and with a simple, rapid, and cost-effective approach.
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DNA Genotek Technical Note

The DNA Genotek OMNIgene•GUT collection system is compatible with the Shoreline Complete microbiome sample preparation kit allowing for convenient stabilization of fecal microbial samples followed by high-throughput lysis and amplification for microbiome NGS profiling.
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Shoreline Biome Workflow Video

Learn how Shoreline Biome's workflow significantly reduces time to result while improving coverage and representation of bacteria in microbiome samples.
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Shoreline Biome DNA Preparation Increases Diversity and Quantity of Difficult to Lyse Gram Positive Firmicutes

This tech note describes how the StrainID kit's representation of different microbial strains compares to other commercially available methods.
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The Microbiome: Understanding Why Collection and Processing Matter

As the understanding of the impact of an individual’s microbiome on their overall health, disease severity, and / or response to medications grows, the importance of high quality and standardized collection and processing techniques becomes ever more important.
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SBAnalyzer™ Software

Learn more about our SBanalyzer software powered by the Athena reference database that enables strain identification and assignment.
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StrainID Kits for PacBio Sequel Systems

Learn more about our StrainID Kits for PacBio Sequel Systems.
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Shoreline Complete V4 & V1V3

Learn more about our V4 and V1V3 16S kits for Illumina Sequencers.
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A More Accurate, Cheaper, Faster Microbiome Preparation Method

Download our joint poster with The Jackson Laboratory titled "A More Accurate, Cheaper, Faster Microbiome Preparation Method: Application to Study the Microbiome in Cocaine Addiction" presented at ASM 2019.
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Microbiome Profiling at the Strain Level Using rRNA Amplicons

Download our joint poster with The Jackson Laboratory titled "Microbiome Profiling at the Strain Level Using rRNA Amplicons".
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